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Integer matrices have to be converted to mp only if they participate in floating-point operations later on.
In this particular cases, just convert the matrices to mp after forming them as integers:
% 1. Compute elements of matrices as integers: % ... (your code from above) % 2. Convert them to mp: A = mp(A); G = mp(G); % 3. Floating-point code with A and G goes afterwards: % ...
P.S.
There is no integer matrices in MATLAB (unless you create them with explicit type - zeros(...,'int32')).
By default, zeros, ones, and everything else is created as double matrices. The floating-point is just not shown if number has no fractional part.
Dear Hector,
The A matrix contains NaN elements - and thus SVD cannot be computed:
>> mp.Digits(2000); >> load Variables1.mat >> isnan(A) ans = 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 1 1 1 0 0 1 1 0 1 1 0 0 0 1 1 0 0 0 0 0 1 1 0 0
Next version of toolbox will show error message if there are NaN and Inf elements in a matrix.
Dear Hector,
Thank you for your assistance and report.
This issue has been fixed. Please use new version of toolbox - 4.0.0.11247.
Thank you.
Could you please send variables.mat to pavel@advanpix.com?
So that I will be able to reproduce the situation.
Yes, absolutely, this is very essential function. It can be called in two ways:
>> mp.Digits(34); >> mp('eps') ans = 1.925929944387235853055977942584927e-34 >> mp.eps ans = 1.925929944387235853055977942584927e-34
There are also similar functions (and many others):
>> mp.realmax ans = 1.189731495357231765085759326628007e+4932 >> mp.realmin ans = 3.362103143112093506262677817321753e-4932
Please take a look to the last section on the page: http://www.advanpix.com/documentation/function-reference/
Dear Hector,
Thank you very much for your report.
The error means that divide&conquer algorithm didn't converge.
Could you please share the input matrix so that I can reproduce the situation?
Thank you,
Pavel.
Dear Mohsen,
Later today we will release new version of toolbox with even faster interp1. Now interp1 hot-spots are implemented directly using C++ and thus it is ~100 times faster overall compared to original version.
However, I am sure that the issue is not related speed, but rather to the properties of the method you use in your script. Is convergence guaranteed for all N?
For some N it converges very quickly, for others - no convergence even after thousands of iterations.
N=79:
>> interp1_test_mp iteration = 1 crit = 6.966185e-01 time = 0.0154 sec iteration = 2 crit = 1.328338e-01 time = 0.0167 sec iteration = 3 crit = 4.058389e-01 time = 0.0207 sec iteration = 4 crit = 9.628735e-01 time = 0.0136 sec iteration = 5 crit = 7.685783e-02 time = 0.0138 sec iteration = 6 crit = 5.120528e-02 time = 0.0138 sec iteration = 7 crit = 6.838371e-02 time = 0.0135 sec iteration = 8 crit = 4.207984e-02 time = 0.0134 sec iteration = 9 crit = 4.638199e-02 time = 0.0281 sec iteration = 10 crit = 2.107455e-02 time = 0.0167 sec iteration = 11 crit = 1.724844e-02 time = 0.0173 sec iteration = 12 crit = 5.805996e-03 time = 0.0172 sec iteration = 13 crit = 2.771057e-03 time = 0.0164 sec iteration = 14 crit = 1.432664e-03 time = 0.0149 sec iteration = 15 crit = 1.115638e-03 time = 0.0156 sec iteration = 16 crit = 1.431466e-03 time = 0.0173 sec iteration = 17 crit = 1.182536e-03 time = 0.0148 sec iteration = 18 crit = 7.638381e-04 time = 0.0145 sec Cp_crit = 0.0007638381016874159474483705763685007N=80:
>> interp1_test_mp iteration = 1 crit = 6.966185e-01 time = 0.0136 sec iteration = 2 crit = 1.707076e-01 time = 0.0126 sec iteration = 3 crit = 1.819746e-01 time = 0.0126 sec .... iteration = 3644 crit = 1.867263e-02 time = 0.0130 sec iteration = 3645 crit = 1.840743e-02 time = 0.0134 sec ....Updated version will be available in a few hours.
Dear Mohsen,
Please download & install new version of toolbox: http://goo.gl/pMXV3
Now it has much faster interp1.
Also I have updated your script with small corrections to be more mp-fiendly:
rng('default'); % Grid length and useful vectors N = 50; kp = linspace(mp('1e-6'),mp(5),N)'; n = mp(ones(1,2)); % parameters & given values gam = mp(2); beta = mp('0.96'); R = mp('1.05'); w0 = mp('3.44'); prob = mp('[0.9500, 0.0500; 0.6750, 0.3250]'); w = sort( w0*( mp('.995') + randn(N,1)/mp('7.5'))); W = [w, mp(zeros(N,1))]; % initialize Cp = R*kp*n; k = Cp; % convergence criterion Cp_crit = 1; % Interpolate until convergence ii = 0; while Cp_crit > 1e-3 start = tic; Cp0 = Cp; EMUp = (Cp.^(-gam))*prob'; C = (beta*R*EMUp).^(-1/gam); k = (kp*n + C - W)/R; % Use the relation between C and k to ropose a new vector Cp corresponding to kp for i=1:2 % Update the function by interpolation. Cp(:,i) = interp1(k(:,i), C(:,i), kp,'linear','extrap'); end Cp_crit = max(max(abs(Cp0-Cp)./(1+abs(Cp)))); ii = ii+ 1; stop = toc(start); fprintf('iteration = %d\ttime = %8.4f sec\n',ii,stop); end disp(Cp_crit)Older version has following timings for N=50:
>> interp1_test_mp iteration = 1 time = 0.9576 sec iteration = 2 time = 0.9761 sec iteration = 3 time = 1.0043 sec iteration = 4 time = 1.0012 sec iteration = 5 time = 1.0255 sec iteration = 6 time = 1.0131 sec iteration = 7 time = 1.0001 sec iteration = 8 time = 0.9991 sec iteration = 9 time = 1.0098 sec iteration = 10 time = 1.0682 sec iteration = 11 time = 1.0019 sec iteration = 12 time = 1.0133 sec iteration = 13 time = 1.0193 sec iteration = 14 time = 1.0049 sec iteration = 15 time = 1.0054 sec iteration = 16 time = 1.0192 sec iteration = 17 time = 1.0178 sec iteration = 18 time = 1.0121 sec Cp_crit = 0.0003433297868733290059017411707557392New one is ~25 times faster:
>> interp1_test_mp iteration = 1 time = 0.0436 sec iteration = 2 time = 0.0449 sec iteration = 3 time = 0.0454 sec iteration = 4 time = 0.0429 sec iteration = 5 time = 0.0429 sec iteration = 6 time = 0.0435 sec iteration = 7 time = 0.0421 sec iteration = 8 time = 0.0424 sec iteration = 9 time = 0.0427 sec iteration = 10 time = 0.0431 sec iteration = 11 time = 0.0431 sec iteration = 12 time = 0.0419 sec iteration = 13 time = 0.0420 sec iteration = 14 time = 0.0416 sec iteration = 15 time = 0.0421 sec iteration = 16 time = 0.0420 sec iteration = 17 time = 0.0422 sec iteration = 18 time = 0.0423 sec Cp_crit = 0.0003433297868733290059017411707557392But, still it might take a lot of time for N=200 to converge. Probably you need to re-design your algorithm to converge in less iterations.
If you are Ok - I will make this thread public, it might be useful for other users.
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Dear Didier,
Thank you very much for the suggestion!
What would be the most important feature set?
(NFFT has quite a bit of features)